We understand the importance of having consistent and normalized metadata that can be used in machine learning applications that power pharmaceutical research.
gene variants, functional studies, guidelines, drug label, clinical trials
KEGG, pharmacokinetic, pharmacodynamic
GEO, ArrayExpress, TCGA
HPO, SNOMED, CDISC, MedDRA, custom ontologies
concept identification, semantic unification
ACMG classification of genetic variants
Knowledge graphs have considerable value across a range of tasks, including drug repurposing, drug toxicity prediction and target gene-disease prioritization. Our knowledge mining services include:
searching for datasets and literature with specific attributes
association of genetic variants or gene expression profiles with disease, drug response, or clinical outcome
genes, diseases, drugs, interactions for deep NLP pipelines
We can help answer scientific questions by analyzing complex, multi-omics data. Our bioinformatics services include:
gene expression, proteomics, metabolomics
complete scRNA-seq pipeline development from FASTQ to clustering
DNA pipeline development to detect SNV, Indel, CNV, SV
survival analysis, significant treatment effect
gene set enrichment analysis
development of predictive models
We combine scientific knowledge and technical expertise in software engineering to provide custom solutions that support practical biotech and pharmaceutical research and development.
cleaning and unifying complex data sets in preparation for downstream analysis
data analysis reports with histograms, scatter plots, volcano plots, heatmaps, and more
migration strategy development which includes selecting, preparing, extracting, and transforming data
development of bioinformatics task automations that support reproducibility and provide measures for fault-tolerance
custom application development to integrate data visualization and pipeline launching
cloud first systems development and integration
Our team of bioinformaticians, biologists, software engineers, and medical doctors are ready to support your research and development efforts in precision medicine, drug discovery, and translational medicine.
Email us at contact@genomicabio.com or call us at (248) 479-3623 to schedule an online meeting to discuss your project and get a quote.